PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678349855
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family FAR1
Protein Properties Length: 771aa    MW: 88320.7 Da    PI: 7.8752
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678349855genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.81.1e-2056131190
       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                +fY+ YA+evGF++r+ + ++s+ +g++++r+fvCskeg++++              +rtgC a ++v+k ++gkw+++++++eHnH++ 
  678349855  56 EFYSVYATEVGFKIRIGQLYRSRVDGSVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKVETGKWVLANIKNEHNHDFE 131
                6***************************************987..............589***************************986 PP

2FAR163.36.8e-20206280189
       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                kfY++YA  +GF++r+ +  +sk++g+it+r+fvCskeg+++++              r gC a ++++++++gkw+v++le+ HnHe+
  678349855 206 KFYHTYAAGIGFRIRIGQLFRSKHDGSITSRRFVCSKEGHQHPS--------------RNGCGAYMRIQRQESGKWVVDRLEKGHNHEF 280
                6***************************************9995..............557**************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.5E-1656131IPR004330FAR1 DNA binding domain
PfamPF031012.0E-15206280IPR004330FAR1 DNA binding domain
PfamPF105513.4E-25380471IPR018289MULE transposase domain
PROSITE profilePS5096610.373657693IPR007527Zinc finger, SWIM-type
PfamPF044341.7E-7663690IPR007527Zinc finger, SWIM-type
SMARTSM005756.7E-8668695IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    Send to blast
MHADPDMNRE VAGSFRKKAA EAVSVSKSNG YPDDDPQSRM EPHVGLEFDS AEEAQEFYSV  60
YATEVGFKIR IGQLYRSRVD GSVISRRFVC SKEGFQTNSR TGCPAFIRVQ KVETGKWVLA  120
NIKNEHNHDF EPSGEVCPPR VQRKSFGTPR SSAGGASRTG IRSHEDDNAS DIENKRPKKE  180
DIDGLSVVRG EPYKGLEFST ANEAYKFYHT YAAGIGFRIR IGQLFRSKHD GSITSRRFVC  240
SKEGHQHPSR NGCGAYMRIQ RQESGKWVVD RLEKGHNHEF EAAVDPSRTV ASKPQKEEGS  300
SAVENLDLVE TNGALSLVKR VIESNIGVDW YDVLLNYFQS RQVEDMGFFY AVELRDGKGM  360
NVFWADSRCR FSCSQFGDAI VFDTSYRRGS YSVPLASFLG VNHHRKPVLL GCALVADESE  420
ESFTWIFQAW AKAMSCCRPV SIIADQDVVI QNSISQVFPG THHRFSSWQI LVKEQENFGQ  480
LFSMNPEFKY EYDACVFQSQ TPSEFDSSWN MLMNKYNLRE NSWFKEMYRM RKSWVPLHVR  540
GTFFAGIPIG GSLKPFFGTI LTPQTPLNEF IIRYEKALEQ HREEERKEDF NSFNLQAVLH  600
TKDPIEEQCR RLYTMTMFKV FQKELLECYS YAGIKINVEG AISRYLVQKC GNGDERNTVA  660
FNASNLNISC SCKMFEFEGI LCRHTLKVFQ IMNIRELPSR YILHRWSKNA KYGILRDVDS  720
AGGLQDFKAL MLWSLREEAR NYIEAGATSL ERYKLAFDIM QEGRRNLCWQ S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090829.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X1
SwissprotQ9M8J30.0FRS7_ARATH; Protein FAR1-RELATED SEQUENCE 7
TrEMBLS8CQQ30.0S8CQQ3_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc10g084220.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA73472130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.10.0FAR1-related sequence 7